Culture

Menopausal night sweats linked with cognitive dysfunction

CLEVELAND, Ohio (September 24, 2019)--Experts frequently tout the value of a good night's sleep. However, a new study casts doubt on the value of sleep time suggesting that women who experience night sweats are more vulnerable to cognitive dysfunction as their sleep duration increases. These paradoxical study results will be presented during The North American Menopause Society (NAMS) Annual Meeting in Chicago, September 25-28, 2019.

Previous studies have demonstrated the association between daytime hot flashes and worse memory performance. In this new study involving women with a history of breast cancer, however, researchers focused on night sweats and how they relate to total sleep time. Surprisingly, more frequent night sweats were associated with greater sleep duration. Even more ironic, however, was the finding that these same women experiencing night sweats became more vulnerable to prefrontal cortex deficits, including decreased attention and executive function, as their sleep duration increased. Total sleep time, however, was unrelated to memory performance.

Separately it was determined that daytime hot flashes had no impact on total sleep time.

"This work presents novel insights into the influence of menopause symptoms on cognitive performance among women with a history of breast cancer and raises the possibility that hot flash treatments could benefit cognition in these women through effects on sleep," says John Bark, lead author of the study from the behavioral neuroscience doctoral program at the University of Illinois at Chicago.

"Studies like this are valuable in helping healthcare providers develop effective treatment options for menopausal women complaining of cognitive decline as they focus on modifiable risk factors," says Dr. Stephanie Faubion, NAMS medical director.

Credit: 
The Menopause Society

Veterans with mental health conditions have higher risk of heart disease, stroke

DALLAS, Sept. 24, 2019 - Veterans with specific mental health disorders - depression , psychosis and bipolar disorder - had an increased risk of heart attack, stroke and death from cardiovascular disease, according to new research published in Circulation: Cardiovascular Quality and Outcomes, an American Heart Association journal.

The link between mental illness and cardiovascular disease is well established. However, there has been little research and data on which mental health conditions pose the highest risk for cardiovascular disease.

In this study, researchers assessed veterans at risk for major heart disease and stroke events and death associated with depression, anxiety, PTSD, psychosis and bipolar disorder. The analysis included data from more than 1.6 million veterans ages 45 to 80 who received care in the Department of Veterans Affairs healthcare system from 2010-2014. About 45% of the men and 63% of the women had been diagnosed with a mental health disorder.

When controlling for age, cardiovascular risk factors such as blood pressure and cholesterol, other mental health conditions and psychiatric medications, both men and women with various mental health diagnoses except post-traumatic stress disorder had a higher risk of cardiovascular events and death over five years. Additional findings from this study:

In particular, among men, depression, anxiety, psychosis and bipolar disorder were associated with an increased risk of death from cardiovascular disease. And, depression, psychosis and bipolar disorder were also linked to cardiovascular events such as heart attack and stroke.

Among women, depression, psychosis and bipolar disorder posed a higher cardiovascular disease risk. Psychosis and bipolar disorder also increased the risk of death.

A diagnosis of psychosis, such as schizophrenia, among both men and women posed the strongest risk for heart attack, stroke and death from cardiovascular disease.

A PTSD diagnosis among men in the study was associated with a lower risk of cardiovascular disease compared to the study population as a whole. This finding differed from some previous studies.

According to the study authors, this is the largest-scale assessment of the associations among different psychiatric conditions and major cardiovascular outcomes. Researchers state that these findings have implications for estimating cardiovascular risk among patients and determining who might benefit from interventions such as cholesterol-lowering medications and blood pressure treatment.

This study was not designed to assess why veterans with mental health conditions have heightened cardiovascular risk, although the authors raise the possibility that chronic stress due to mental health problems could play a role.

"The bottom line is that when considering a veteran's health care needs, mental health status, especially for more severe mental illnesses, should be taken into consideration when calculating cardiovascular disease risk and considering the appropriate treatment options," said Mary C. Vance, M.D., M.Sc., an employee of the Henry M. Jackson Foundation working as assistant professor of psychiatry at the Uniformed Services University School of Medicine and lead author of the study.

The researchers say that although their study population was large, results could differ in a population outside of the Veterans Affairs health system.

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Co-authors are Wyndy L. Witala, Ph.D.; Jeremy B. Sussman, M.D., M.S.; Paul Pfeiffer, M.D., M.S.; and Rodney A. Hayward, M.D.

Author disclosures and funding sources are available on the manuscript.

Additional Resources:

Available multimedia is on right column of release link - https://newsroom.heart.org/news/veterans-with-mental-health-conditions-have-higher-risk-of-heart-disease-stroke?preview=b2c43b33fa8b127401f6b8b2060ef071

Statements and conclusions of study authors published in American Heart Association scientific journals are solely those of the study authors and do not necessarily reflect the Association's policy or position. The Association makes no representation or guarantee as to their accuracy or reliability. The Association receives funding primarily from individuals; foundations and corporations (including pharmaceutical, device manufacturers and other companies) also make donations and fund specific Association programs and events. The Association has strict policies to prevent these relationships from influencing the science content. Revenues from pharmaceutical and device corporations and health insurance providers are available at https://www.heart.org/en/about-us/aha-financial-information.

About the American Heart Association

The American Heart Association is a relentless force for a world of longer, healthier lives. We are dedicated to ensuring equitable health in all communities. Through collaboration with numerous organizations, and powered by millions of volunteers, we fund innovative research, advocate for the public's health and share lifesaving resources. The Dallas-based organization has been a leading source of health information for nearly a century. Connect with us on heart.org, Facebook, Twitter or by calling 1-800-AHA-USA1.

Credit: 
American Heart Association

Gum disease linked with higher risk of hypertension

Sophia Antipolis, 24 September 2019: People with gum disease (periodontitis) have a greater likelihood of high blood pressure (hypertension), according to a study published today in Cardiovascular Research, a journal of the European Society of Cardiology (ESC).1

Senior author Professor Francesco D'Aiuto of UCL Eastman Dental Institute, UK, said: "We observed a linear association - the more severe periodontitis is, the higher the probability of hypertension. The findings suggest that patients with gum disease should be informed of their risk and given advice on lifestyle changes to prevent high blood pressure such as exercise and a healthy diet."

High blood pressure affects 30-45% of adults and is the leading global cause of premature death,2 while periodontitis affects more than 50% of the world's population. Hypertension is the main preventable cause of cardiovascular disease, and periodontitis has been linked with increased risk of heart attack and stroke.

"Hypertension could be the driver of heart attack and stroke in patients with periodontitis," said Professor D'Aiuto. "Previous research suggests a connection between periodontitis and hypertension and that dental treatment might improve blood pressure, but to date the findings are inconclusive."

This study compiled the best available evidence to examine the odds of high blood pressure in patients with moderate and severe gum disease. A total of 81 studies from 26 countries were included in the meta-analysis.

Moderate-to-severe periodontitis was associated with a 22% raised risk for hypertension, while severe periodontitis was linked with 49% higher odds of hypertension. Lead author Dr Eva Munoz Aguilera of UCL Eastman Dental Institute said: "We observed a positive linear relationship, with the hazard of high blood pressure rising as gum disease became more severe."

Average arterial blood pressure was higher in patients with periodontitis compared to those without. This amounted to 4.5 mmHg higher systolic and 2 mmHg higher diastolic blood pressures. "The differences are not negligible," said Dr Munoz Aguilera. "An average 5 mmHg blood pressure rise would be linked to a 25% increased risk of death from heart attack or stroke."

Just 5 out of 12 interventional studies included in the review showed a reduction in blood pressure following gum treatment. The changes occurred even in people with healthy blood pressure levels.

Professor D'Aiuto said: "There seems to be a continuum between oral health and blood pressure which exists in healthy and diseased states. The evidence suggesting periodontal therapy could reduce blood pressure remains inconclusive. In nearly all intervention studies, blood pressure was not the primary outcome. Randomised trials are needed to determine the impact of periodontal therapy on blood pressure."

Regarding potential reasons for the connection between the conditions, gum disease and the associated oral bacteria lead to inflammation throughout the body, which affects blood vessel function. Common genetic susceptibility could also play a role, along with shared risk factors such as smoking and obesity.

Professor D'Aiuto said: "In many countries throughout the world, oral health is not checked regularly, and gum disease remains untreated for many years. The hypothesis is that this situation of oral and systemic inflammation and response to bacteria accumulates on top of existing risk factors."

He noted that the study investigated gum disease as a potential risk factor for hypertension, but the reverse could also be true. "Further research is needed to examine whether patients with high blood pressure have a raised likelihood of gum disease. It seems prudent to provide oral health advice to those with hypertension," he said.

Credit: 
European Society of Cardiology

Global liquidity shocks impact house prices

New research from Cass Business School has found that global liquidity shocks do impact house prices in both emerging and advanced economies but this can be mitigated by government policy.

In Global liquidity, house prices and policy responses, which is published in the Journal of Financial Stability, researchers investigated the impact of global liquidity on house prices around the world. They used a new measure of liquidity, which focused on the private component of liquidity of the major wholesale funding markets for financial intermediaries - the repurchase agreement (repo) market not only in the US, but also in the UK and Europe from 2000-2014.

The study is the first to investigate the effect of macroprudential policy on house prices and credit growth and examines its ability to shield countries from global shocks, as opposed to domestic credit conditions. Macroprudential policy is the approach to financial regulation that aims to mitigate risk to the financial system as a whole.

"Although it is understood that global liquidity triggers global house price movements, we discovered that this effect does not only originate from the US but from other important financial systems including the UK," explained co-author, Professor Kate Phylaktis of Cass Business School.

"We can now confirm that while house prices in advanced countries such as Switzerland, Canada and Australia react to liquidity shocks regardless of their origin, the effect is short-lived and turns insignificant within one year. In emerging markets, the response is greater and more persistent.

"This impact is channelled through increases in cross border bank flows, which feed into the local banking system triggering long lasting effects in the domestic housing markets. This signals the important role that banks play in the transmission of global shocks to the real economy."

Professor Phylaktis said an example of a global liquidity shock is the increase in liquidity by the Federal Reserve Board, the Bank of England and the European Central Bank in the aftermath of the Global Financial Crisis, which spurred the resumption of the upward trend in bank flows and house prices, following the liquidity dry-ups and the worsening of credit conditions around the world during the crisis. In response to potential vulnerabilities to financial stability and economic growth, arising from credit cycles, countries have developed policy frameworks, such as a variety of macroprudential policies.

The researchers found that countries' exposure to shocks can be mitigated by housing-related macroprudential and monetary policies but there are striking differences in effectiveness of these policies in advanced and emerging markets.

Professor Phylaktis said advanced economies can rely on monetary policy and macroprudential instruments, especially housing-related measures such as caps on loan to value (LTV), housing capital buffers, and housing loan loss provision, to shield their housing markets from global shocks.

"However, we found that the majority of the instruments in emerging markets are only marginally effective, and monetary policy only mitigates the impact of global shocks to emerging economies. We suggest that emerging markets adopt focused restrictions to non-resident investments in the local real estate sector, as these have been found to be effective in limiting the liquidity impact on house prices."

Credit: 
City St George’s, University of London

Scientists and key figures develop vision for managing UK land and seas after Brexit

image: Shellfish fishing boats in Whitby, North Yorkshire.

Image: 
Bryce Stewart, University of York.

Researchers have outlined how fishing and farming policies could be created to protect employment opportunities and the environment after Brexit.

The team of researchers, led by scientists at the University of York, consulted with key figures from the agriculture and fishing industries nationwide to produce a framework for managing land and seas after the UK has left the EU.

The results highlight how leaving both the EU's Common Agricultural Policy and the Common Fisheries Policy is an opportunity for the UK to shift its focus to protecting the environment and livelihoods, rather than maximising production.

However, the ability to deliver on this vision will be severely compromised by a no-deal Brexit, the researchers warn.

Lead author of the study, Dr Bryce Stewart, from the Department of Environment and Geography at the University of York, said: "The UK has a rare opportunity to rewrite the rulebook to focus on effective agricultural, environmental and fisheries management and become a world-leader in these spheres.

"However, we have grave concerns about a no-deal Brexit across the board. For example, in the fishing industry the imposition of WTO rules could lead to tariffs of 7.5% to 24% on seafood exported to the EU.

"The UK would find itself under pressure to lower environmental protections and welfare standards across the farming and fishing industries to be competitive in markets outside of the EU.

"With widespread agreement that a no-deal Brexit will lead to a decline in economic growth, the resources and political will to deliver on sustainable practices may also be in short supply."

The report highlights the need for UK policy makers to adopt an "ecosystem based" approach, which prioritises the protection of natural assets and provides enough resources to fund and reward sustainable farming and fishing practices so that products can remain competitively priced, while protecting principles of environmental justice; sustainable environmental management and community livelihoods.

High levels of cooperation with other European nations would also continue to be required after Brexit to ensure consistency, collaboration and the efficient movement of goods and labour, the researchers say.

The recommendations of the report include:

Give greater voice to local and regional stakeholders (such as inshore fishing communities, which make up over 75% of the UK fleet) to ensure more locally appropriate and informed management decisions.

Sustainable management and redesign of agricultural practices in the environment based on developing and implementing joint land use, food and rural policy strategies.

Reforming farming subsidies so that farmers are paid for producing public goods that benefit nature and society.

Further develop partnerships between the fishing industry and scientists to improve knowledge of stocks and marine ecosystems.

Conserve Marine Protected Areas.

Co-author, Professor Sue Hartley, Director of the York Environmental Sustainability Institute, said: "Our research highlights that policy makers should recognise that healthy environments deliver 'public goods' such as clean air and water, food provision and places for leisure, that belong to all of us, and that the continued provision of these goods means providing sufficient resource to publicly reward sustainable farming and fishing practices."

Professor Charlotte Burns, joint lead author of the study, from the University of Sheffield, added: "Significant challenges lie ahead. In the face of continued uncertainty over Brexit, much of the UK's new policy on the environment, agriculture and fisheries is currently ambitious in vision but light on detail. There is also a risk that leaving the EU will weaken existing environmental protection."

"The development of innovative policies, with significant input from the major players in the industries across UK countries, will therefore be essential for ensuring environmental sustainability and prosperity after Brexit."

Credit: 
University of York

Impostor syndrome is more common than you think; Study finds best way to cope with it

image: A student experiences impostor syndrome in this photo illustration.

Image: 
Photo Illustration by BYU Photo

The impostor syndrome, a phenomenon that manifests when people feel like frauds even if they are actually capable and well-qualified, affects people both in the workplace and in the classroom. A new study reveals that perceptions of impostorism are quite common and uncovers one of the best -- and worst -- ways to cope with such feelings.

Findings of the study, co-authored by Brigham Young University professors Jeff Bednar, Bryan Stewart, and James Oldroyd, revealed that 20 percent of the college students in their sample suffered from very strong feelings of impostorism. The researchers conducted interviews with students in an elite academic program to understand the various coping mechanisms students used to escape these feelings, but one particular method stood out above the rest: seeking social support from those outside their academic program.

The findings of their interview study suggest that if students "reached in" to other students within their major, they felt worse more often than they felt better. However, if the student "reached out" to family, friends outside their major, or even professors, perceptions of impostorism were reduced.

"Those outside the social group seem to be able to help students see the big picture and recalibrate their reference groups," said Bednar, a BYU management professor and co-author on the study. "After reaching outside their social group for support, students are able to understand themselves more holistically rather than being so focused on what they felt they lacked in just one area."

Along with seeking social support, the study also uncovered negative ways students coped with impostorism. Some students tried to get their mind off schoolwork through escapes such as video games but ended up spending more time gaming than studying. Other students tried to hide how they really felt around their classmates, pretending they were confident and excited about their performance when deep down they questioned if they actually belonged.

In a second study, the researchers surveyed 213 students to confirm what was revealed in their interview study about seeking social support: reaching out to individuals outside the major proved to be more effective than reaching in to individuals within the major.

Surprisingly, the study also reveals that perceptions of impostorism lack a significant relationship with performance. This means that individuals who suffer with the impostor syndrome are still capable of doing their jobs well, they just don't believe in themselves. Researchers also explain that social-related factors impact impostorism more than an individual's actual ability or competence.

"The root of impostorism is thinking that people don't see you as you really are," said Stewart, an accounting professor at BYU and co-author on the study. "We think people like us for something that isn't real and that they won't like us if they find out who we really are."

Outside the classroom, researchers believe that implications from this study can and should be applied in the workplace as well. "It's important to create cultures where people talk about failure and mistakes," Bednar said. "When we create those cultures, someone who is feeling strong feelings of impostorism will be more likely to get the help they need within the organization."

Credit: 
Brigham Young University

Log-periodic quantum oscillations and discrete scale invariance in Dirac materials

image: (a) Log-periodic MR oscillations in HfTe5 after subtracting the background. (b) Temperature dependence of the logB-periodic oscillations. (c) Signals of logB-periodic oscillations in the Hall traces of HfTe5. (d) Comparison of the oscillations in MR and Hall traces for the same sample.

Image: 
©Science China Press

One fundamental problem of quantum electrodynamics is the fate of the superheavy atomic nucleus, which is proposed to collapse when the atomic number exceeds certain value. However, this intriguing supercritical collapse phenomenon remains elusive in experiments. Discrete scale invariance (DSI) is a scale anomaly with the violation of the continuous scale symmetry. The intriguing log-periodicity is the characteristic signature of DSI, which exists in rupture, growth processes, turbulence, finance, and so on. The DSI feature is of high interest in quantum physics, while it can be rarely realized in quantum systems experimentally. The previously known example with DSI in quantum physics only focuses on the Efimov trimer state.

A novel type of quantum magneto-resistance oscillations has been observed in topological material ZrTe5 (Science Advances 4, eaau5096 (2018)), constituting the third known distinctive type of periodicity in the nearly 90 years searching for quantum oscillations in solids. Moreover, the discovery of the exotic logB periodic oscillations can virtually represent the discrete scale invariance associated with the quasi-bound states formed through supercritical atomic collapse in Dirac materials. Such peculiar feature is supposed to be universal in Dirac materials with Coulomb attraction. Thus, it is desirable to extend the investigations to other topological systems, and more importantly to other physical observables. In a new work published in the National Science Review, Beijing-based research collaboration led by Prof. Jian Wang, Prof. Haiwen Liu and Prof. Jiyan Dai has revealed the universality of the log-periodic quantum magneto-oscillations and DSI phenomenon in Dirac materials by magneto-transport results of HfTe5 crystals.

Scientists measured the magneto- and Hall resistance of the HfTe5 crystals at pulsed magnetic fields up to 58 T and static magnetic fields up to 25 T. Clear logB-periodic quantum oscillations signaling of DSI are observed in the longitudinal magneto-resistance (MR) (subfigure (a)), independent on the minor differences of the sample quality. The temperature dependence of the logB-periodic oscillations in HfTe5 is shown in subfigure (b). One can see that the log-periodic features become invisible when the temperature is increased to be above 80 K. Furthermore, for the first time, the DSI signal with remarkable logB-periodicity is discovered in the Hall traces of the HfTe5 crystals. The finding indicates an overall effect of the DSI feature on the transport properties of the system. The second derivate results of the Hall data are shown in the subfigure (c). In addition, the MR and Hall results on the same sample are shown in subfigure (d). It is found that in the oscillations the phase of Hall data is slightly ahead of MR, reminiscent of that in the two-dimensional quantum Hall effect.

The log-periodic oscillations in Dirac materials were attributed to the supercritical atomic collapse phenomenon and the concomitant quasi-bound states featuring discrete scale invariance in Dirac materials. The quasi-particle in Dirac materials obeys the relativistic equation, and the Fermi velocity is much smaller than the speed of light in vacuum. Thus, the value of the fine-structure constant in Dirac materials is much larger than that in vacuum, which provides a promising platform to investigate the supercritical atomic collapse phenomenon. Owing to the large value of the fine-structure constant in these solid state systems, the Coulomb attraction gives rise to the supercritical atomic collapse in analogy to the phenomenon proposed to exist in superheavy atoms. Moreover, the massless Dirac equation with Coulomb attraction preserves the discrete scale invariance, in contrast to the discrete scale symmetry breaking in massive Dirac equation of superheavy atoms.

In topological material HfTe5, the log-periodic quantum oscillations in both the longitudinal MR and the Hall resistance are closely related to the quasi-bound states of Weyl particles from the hole band with long-range Coulomb attraction when the carrier density is so dilute, and the long-range Coulomb attraction is generated by the charge impurity or the opposite type of carriers. Aside from the quasi-bound states near the Coulomb center, large number of mobile carriers also exist in the Fermi surface. Thus, the resonant scattering between the mobile carriers and the quasi-bound states around the Fermi level determine the transport properties of the material, e.g. the longitudinal MR and the Hall traces. Further theoretical analysis signify that the π/2 phase shift originates from the resonant scattering between the mobile carriers and the quasi-bound states, sharing the same origin of the log-periodic oscillations. Moreover, scientists have analyzed the influence of a small band gap on the DSI feature and clarified its relevance to various topological materials.

Dirac materials showing log-periodicity provide promising platforms to investigate the rarely observed supercritical atomic collapse phenomenon and the discrete scale invariance feature. This work provides new insights towards further understanding of the universality and the physical nature of the log-periodic quantum oscillations in Dirac materials.

Credit: 
Science China Press

Decoding a new sign in chromatin maze:

image: Dr. Li's team discovered a new histone modification, glutarylation at histone H4 lysine 91, that locates at 'open' chromatin where genes are highly expressed - equivalent to a road sign in the maze showing 'expressway'.

Image: 
@The University of Hong Kong

A research team led by Dr Xiang David Li, Associate Professor from the Department of Chemistry, in collaboration with Dr Karen Wing Yee Yuen from the School of Biological Sciences and Dr Jason Wing Hon Wong from the School of Biomedical Sciences at The University of Hong Kong (HKU), revealed a new fundamental mechanism by which a cell can make necessary changes in its chromatin structure in response to different DNA-associated processes such as gene expression and DNA damage repair. The findings were recently published in the prestigious scientific journal Molecular Cell.

Imagine, for a moment, that you are now living in the centre of an ever-shifting maze: paths moving about and breaking apart, wide, straight roads curling up and shrinking into tight, winding tracks, new roads appearing from what used to be dead-ends. Travelling through this labyrinth, the only thing guiding you on the way is various road signs (e.g., "STOP", "SLOW", "ONE WAY" and "DO NOT ENTER") that indicate whether and how you may traverse different paths.

One such maze lies within our every cell: the chromatin, in which DNA is packaged with proteins called histones. Packaging of DNA can be tighter or looser in different regions of chromatin. While a loose packaging indicates an "active" or a gene "ON" region, a tight compaction means a "silent" or a gene "OFF" region. Interestingly, the chromatin also contains various "road signs" in the form of chemical modifications to histones (or histone marks) that indicate the active, inactive or damaged regions of the chromatin and give order to various chromatin-associated machineries in the regulation of gene expression, DNA replication and damage repair. While some well-known chromatin "road signs" such as lysine acetylation (Kac) and methylation (Kme) have been well characterised, the biological meanings of many other "signs", particularly those newly identified histone marks, remain mysterious.

In a search for new chromatin "road sign", Dr Li's team discovered a novel histone mark, lysine glutarylation (Kglu) at histone H4, Lysine-91 (H4K91glu) from human cells. "I was so excited to find this new histone mark. Now imagine that in the maze you come across a new sign that you've not seen before. Who puts it there? What does it mean?" said Dr Xiucong Bao, a postdoctoral fellow in Dr Li's lab and the first author of the study, but she also notes the great challenge to uncover these mysteries, for which she has spent more than five years on the project. The researchers finally found that this mark is especially abundant in promoter regions of active, "open" chromatin where genes are highly expressed - equivalent to a road sign in the maze showing "expressway". "We believe that H4K91glu is a "sign" for activation of gene expression," said Dr Li. "And this 'sign' seems to be conserved in evolution, as we found it in not only human but also mouse, fly, worm and even baker's yeast cells."

Besides marking the active genomic region, H4K91glu in fact directly contributes to the formation of the more open accessible chromatin structure facilitating gene expression. Dr Li's team found in this study that H4K91glu destabilizes nucleosome, the basic repeating unit of chromatin, and leads to activation or "opening" of chromatin. "It makes perfect sense if you know chemistry, as the mark puts a negative charge on an originally positively charged lysine residue. It therefore causes a charge-charge repulsion within the nucleosome and makes it more prone to falling apart," says Dr Li.

Much like the ever-shifting maze, chromatin packaging is highly dynamic. A compacted region of chromatin at this moment can quickly change to a relaxed one at the next moment, which allows fast switching between gene ON and OFF states. Meanwhile, when chromatin structure is changed at a specific region, the old "road signs" (i.e., histone marks) are taken off and the new ones are installed by enzymes called histone mark "erasers" and "writers", respectively. "To understand a histone mark, it is key to find its "writer" and "eraser", says Li, whose team further identified the enzymes that "write" and "erase'"= the H4K91glu mark: KAT2A, working together with the α-ketoadipate dehydrogenase (α-KADH) complex, adds the H4K91glu mark, while SIRT7 works to remove it. The researchers went on to demonstrate that H4K91glu must be removed by SIRT7 such that the open chromatin region could be inactivated and condensed during cell division or at local DNA damage site.

In summary, Dr Li's study identified H4K91glu as a novel histone mark and unraveled its regulation and function in chromatin structure and dynamics, putting us one step closer towards deciphering the yet mysterious chromatin maze. The findings from this study also laid the foundation for elucidating how this novel histone mark contributes to human health and disease and will open opportunities for development of therapeutic agents for the treatment of human diseases associated with mis-regulation of histone H4K91glu and chromatin structure.

Credit: 
The University of Hong Kong

Systematic review and meta-analysis suggests artificial intelligence may be as effective as health professionals at diagnosing disease

Artificial intelligence (AI) appears to detect diseases from medical imaging with similar levels of accuracy as health-care professionals, according to the first systematic review and meta-analysis, synthesising all the available evidence from the scientific literature published in The Lancet Digital Health journal.

Nevertheless, only a few studies were of sufficient quality to be included in the analysis, and the authors caution that the true diagnostic power of the AI technique known as deep learning--the use of algorithms, big data, and computing power to emulate human learning and intelligence--remains uncertain because of the lack of studies that directly compare the performance of humans and machines, or that validate AI's performance in real clinical environments.

"We reviewed over 20,500 articles, but less than 1% of these were sufficiently robust in their design and reporting that independent reviewers had high confidence in their claims. What's more, only 25 studies validated the AI models externally (using medical images from a different population), and just 14 studies actually compared the performance of AI and health professionals using the same test sample," explains Professor Alastair Denniston from University Hospitals Birmingham NHS Foundation Trust, UK, who led the research. [1]

"Within those handful of high-quality studies, we found that deep learning could indeed detect diseases ranging from cancers to eye diseases as accurately as health professionals. But it's important to note that AI did not substantially out-perform human diagnosis." [1]

With deep learning, computers can examine thousands of medical images to identify patterns of disease. This offers enormous potential for improving the accuracy and speed of diagnosis. Reports of deep learning models outperforming humans in diagnostic testing has generated much excitement and debate, and more than 30 AI algorithms for healthcare have already been approved by the US Food and Drug Administration.

Despite strong public interest and market forces driving the rapid development of these technologies, concerns have been raised about whether study designs are biased in favour of machine learning, and the degree to which the findings are applicable to real-world clinical practice.

To provide more evidence, researchers conducted a systematic review and meta-analysis of all studies comparing the performance of deep learning models and health professionals in detecting diseases from medical imaging published between January 2012 and June 2019. They also evaluated study design, reporting, and clinical value.

In total, 82 articles were included in the systematic review. Data were analysed for 69 articles which contained enough data to calculate test performance accurately. Pooled estimates from 25 articles that validated the results in an independent subset of images were included in the meta-analysis.

Analysis of data from 14 studies comparing the performance of deep learning with humans in the same sample found that at best, deep learning algorithms can correctly detect disease in 87% of cases, compared to 86% achieved by health-care professionals.

The ability to accurately exclude patients who don't have disease was also similar for deep learning algorithms (93% specificity) compared to health-care professionals (91%).

Importantly, the authors note several limitations in the methodology and reporting of AI-diagnostic studies included in the analysis. Deep learning was frequently assessed in isolation in a way that does not reflect clinical practice. For example, only four studies provided health professionals with additional clinical information that they would normally use to make a diagnosis in clinical practice. Additionally, few prospective studies were done in real clinical environments, and the authors say that to determine diagnostic accuracy requires high-quality comparisons in patients, not just datasets. Poor reporting was also common, with most studies not reporting missing data, which limits the conclusions that can be drawn.

"There is an inherent tension between the desire to use new, potentially life-saving diagnostics and
the imperative to develop high-quality evidence in a way that can benefit patients and health systems in clinical practice," says Dr Xiaoxuan Liu from the University of Birmingham, UK. "A key lesson from our work is that in AI--as with any other part of healthcare--good study design matters. Without it, you can easily introduce bias which skews your results. These biases can lead to exaggerated claims of good performance for AI tools which do not translate into the real world. Good design and reporting of these studies is a key part of ensuring that the AI interventions that come through to patients are safe and effective." [1]

"Evidence on how AI algorithms will change patient outcomes needs to come from comparisons with alternative diagnostic tests in randomised controlled trials," adds Dr Livia Faes from Moorfields Eye Hospital, London. "So far, there are hardly any such trials where diagnostic decisions made by an AI algorithm are acted upon to see what then happens to outcomes which really matter to patients, like timely treatment, time to discharge from hospital, or even survival rates." [1]

Writing in a linked Comment, Dr Tessa Cook from the University of Pennsylvania, USA, discusses whether AI can be effectively compared to the human physician working in the real world, where data are "messy, elusive, and imperfect". She writes: "Perhaps the better conclusion is that, the narrow public body of work comparing AI to human physicians, AI is no worse than humans, but the data are sparse and it may be too soon to tell."

Credit: 
The Lancet

How the brain repurposes unused regions

image: Naturalistic auditory stories synchronize "visual" cortices across congenitally blind but not sighted individuals.

Image: 
Loiotile et al., <i>JNeurosci</i> (2019)

In adults that are born blind, the "visual" cortex is activated in a similar way during a listening task, according to new research in JNeurosci. The results answer questions about how development can override anatomy to influence brain function.

Previous research observed that the "visual" cortex in blind people is recruited for other functions, but it was not known if the new purpose was consistent or varied from person to person.

Loiotile et al. used functional magnetic resonance imaging to compare how the auditory and visual cortices of the brain were activated in blind and blindfolded, sighted participants while listening to audio clips from movies. Sixty-five percent of the regions in the visual cortex had similar activation among the blind participants when they listened to the movie clips. The similarity diminished when the sentences were played in a random order or the track was played backwards, indicating that the region is used for higher-order processing. These results suggest that there is an underlying organization that dictates how the visual cortex is repurposed in blind people, and that it is not random.

Credit: 
Society for Neuroscience

Researchers resolve how fungi produce compounds with potential pharmaceutical applications

image: Representation of theof Diels-Alderase complex structure with premalbrancheamide, one of the natural products produced by the fungi shown.

Image: 
Illustration by Life Sciences Institute multimedia designer Rajani Arora.

ANN ARBOR--Research led by the University of Michigan Life Sciences Institute has solved a nearly 50-year-old mystery of how nature produces a large class of bioactive chemical compounds.

The findings are scheduled for publication on Sept. 23 in the journal Nature Chemistry.

The compounds, called prenylated indole alkaloids, were first discovered in fungi in the 1970s. Since then, they have attracted considerable interest for their wide range of potential applications as useful drugs. One compound is already used worldwide as an antiparasitic for livestock.

Understanding how the fungi build these chemicals is essential to reproducing them and creating variants in the lab for new applications. The fungi's genes encode enzymes, and these enzymes use very simple building blocks to perform each step to build the complex molecule.

But despite the longstanding knowledge about these compounds, researchers have not been able to tease apart the precise enzymes and reactions that the fungi use to produce them.

"But if we can actually isolate the genes involved and make these enzymes, we should be able to recreate the entire bio-assembly line in a test tube," said Qingyun Dan, a researcher in the lab of Janet Smith at the Life Sciences Institute and a lead author on the study. "But, until now, no lab has been able to do so."

Using a collaborative approach that combined synthetic chemistry, genetics, enzymology, computational chemistry and structural biology over the course of a decade, the researchers have revealed the process--and uncovered a surprising chemical twist. The final step in the assembly process is a reaction that is nearly unprecedented in nature: the Diels-Alder reaction.

"This reaction is one of the fundamentals of synthetic organic chemistry, going back to the 1920s when it was first discovered," said LSI faculty member David Sherman, one of the senior authors of the study.

"But even within the last few years, there has been major debate in the field about whether this reaction actually exists in nature. It's just the most phenomenal, unexpected path to this fascinating class of indole alkaloids."

The researchers believe that discovering the enzyme that enables the Diels-Alder reaction--and resolving how these compounds are made in nature--now opens two exciting paths forward.

First, the particular enzyme that catalyzes this Diels-Alder reaction could help improve one of the most commonly used chemical reactions. This enzyme performs the reaction with specificity that far outperforms what can commonly be achieved in the lab, meaning it creates only the one desired compound and no unintended byproducts.

Second, because the researchers were able to obtain a crystal structure of the enzyme performing the Diels-Alder reaction, they now have a clear picture of how the enzyme directs the reaction in nature--and how it might be harnessed to create new compounds in the future.

"This is a very good example of the explanatory power of crystal structures," said Sean Newmister, a researcher in Sherman's lab and a lead author on the study. "We gain mechanistic insight into the activity of the enzyme we're studying, but also insight into how to use this as a tool to synthesize new chemical compounds with biological activities. And that's really exciting."

Credit: 
University of Michigan

Study shows MRI can help remove DOUBT when diagnosing minor strokes

A University of Calgary-led international study is highlighting the importance of magnetic resonance imaging (MRI) in helping to diagnose minor stroke and transient ischemic attacks (TIAs).

The six-year study, which included researchers from hospitals in Canada, Australia and the Czech Republic, involved 1028 patients who experienced a number of symptoms that aren't always associated with stroke--such as numbness, dizziness, or very short episodes of weakness or difficulty with speech.

Principal investigator Dr. Shelagh Coutts, MD, a member of the Cumming School of Medicine's (CSM), Hotchkiss Brain Institute, and a neurologist at Alberta Health Services' Foothills Medical Centre, says that, because the risk of stroke increases after a first TIA, it is important that physicians are certain of the diagnosis in low-risk cases with non-traditional symptoms.

Patients with motor or speech symptoms lasting more than five minutes are at high risk of having a stroke and must been seen urgently. The problem is that over 50 per cent of patients with possible symptoms of a TIA do not have these symptoms.

"If you don't have motor and speech symptoms, the diagnosis is a lot less clear--so patients with numbness, dizziness or with difficulty walking may not be diagnosed with a stroke syndrome. These patients are, overall, felt to be at low-risk of having stroke," says Coutts, a professor in the departments of Clinical Neurosciences, Radiology, and Community Health Sciences at the CSM.

Physicians involved in the study group--Diagnosis of Uncertain-Origin Benign Transient Neurological Symptoms (DOUBT)--examined patients within eight days of the start of their symptoms. They performed a detailed neurological assessment, took a patient history, made a diagnosis, and then did an MRI scan within the first week--followed by a second diagnosis.

"We found in this study that there was a 13 per cent risk of having had a stroke," adds Coutts. "This was far higher than we expected in this low risk population."

Further, in 30 per cent of patients in the study, the physicians changed their diagnosis based on the MRI scan.

"That's not just to change patients to having a stroke," notes Coutts. "There's also the reverse where we thought they might have had a stroke or TIA but based on a negative MRI scan (and other clinical symptoms) we decided it wasn't."

In many patients with minor stroke or TIA, Coutts says that symptoms are straightforward and a stroke can be diagnosed--or ruled out--without the need for MRI scans.

"In a patient in whom it is quite clear to the physician treating them that they have had a transient ischemic attack, then usually an MRI scan isn't actually that helpful. The MRI is really useful in patients in whom we are unclear what the diagnosis is."

And from a patient perspective (if the MRI is negative), knowing they haven't had a TIA is very important, she says, as it reduces the use of unnecessary medication.

"The MRI can be done in the first week as an outpatient," notes Dr. Michael Hill, MD, a co-author of the paper, and neurologist at Alberta Health Services' Foothills Medical Centre and member of the CSM's Hotchkiss Brain Institute and the O'Brien Institute for Public Health.

"It is not an emergency, same-day test. The MRI has an important predictive value. A normal test means that the patient most likely has not suffered a stroke syndrome and the risk of future stroke is very, very low," adds Hill, a professor in the departments of Clinical Neurosciences, Community Health Sciences, Medicine, and Radiology, at the CSM.

Credit: 
University of Calgary

Is theory on Earth's climate in the last 15 million years wrong?

image: Left: Large coccoliths - disks made of calcium carbonate that armor single-celled algae called coccolithophores - from the Middle Miocene about 16 million to 11.6 million years ago. Right: Small coccoliths from the Pleistocene about 2.6 million to 11,700 years ago.

Image: 
Weimin Si

A key theory that attributes the climate evolution of the Earth to the breakdown of Himalayan rocks may not explain the cooling over the past 15 million years, according to a Rutgers-led study.

The study in the journal Nature Geoscience could shed more light on the causes of long-term climate change. It centers on the long-term cooling that occurred before the recent global warming tied to greenhouse gas emissions from humanity.

"The findings of our study, if substantiated, raise more questions than they answered," said senior author Yair Rosenthal, a distinguished professor in the Department of Marine and Coastal Sciences in the School of Environmental and Biological Sciences at Rutgers University-New Brunswick. "If the cooling is not due to enhanced Himalayan rock weathering, then what processes have been overlooked?"

For decades, the leading hypothesis has been that the collision of the Indian and Asian continents and uplifting of the Himalayas brought fresh rocks to the Earth's surface, making them more vulnerable to weathering that captured and stored carbon dioxide - a key greenhouse gas. But that hypothesis remains unconfirmed.

Lead author Weimin Si, a former Rutgers doctoral student now at Brown University, and Rosenthal challenge the hypothesis and examined deep-sea sediments rich with calcium carbonate.

Over millions of years, the weathering of rocks captured carbon dioxide and rivers carried it to the ocean as dissolved inorganic carbon, which is used by algae to build their calcium carbonate shells. When algae die, their skeletons fall on the seafloor and get buried, locking carbon from the atmosphere in deep-sea sediments.

If weathering increases, the accumulation of calcium carbonate in the deep sea should increase. But after studying dozens of deep-sea sediment cores through an international ocean drilling program, Si found that calcium carbonate in shells decreased significantly over 15 million years, which suggests that rock weathering may not be responsible for the long-term cooling.

Meanwhile, the scientists - surprisingly - also found that algae called coccolithophores adapted to the carbon dioxide decline over 15 million years by reducing their production of calcium carbonate. This reduction apparently was not taken into account in previous studies.

Many scientists believe that ocean acidification from high carbon dioxide levels will reduce the calcium carbonate in algae, especially in the near future. The data, however, suggest the opposite occurred over the 15 million years before the current global warming spell.

Rosenthal's lab is now trying to answer these questions by studying the evolution of calcium and other elements in the ocean.

Credit: 
Rutgers University

Croc-like carnivores terrorised Triassic dinosaurs in southern Africa 210 million years ago

image: Artist's reconstruction of two rauisuchians fighting over a desiccated corpse of a mammal-relative in the Triassic of southern Africa. In the background, dinosaurs and mammal-like reptiles form other parts of the ecosystem.

Image: 
Viktor Radermacher, owns copyright

"These ancient fossils provide us with evidence of how at least two predator species hunted these vegetarian dinosaurs 210 million-years-ago. It is amazing to follow the clues left behind in fossilised teeth, jaws, limbs and other fossils to help us tell the ancient story of life in southern Africa," says Tolchard.

The fossils studied by Tolchard include teeth, pieces of jaws, hind limbs and body armour, all of which are can be described as parts of rauisuchians.

Rauisuchians are closely related to crocodiles as we know them today. They had a diversity of body shapes and sizes during the Triassic period. The specimens described in this research include some of the largest carnivorous members of this group, that were possibly up to 10 metres long, with huge skulls full of serrated, curved teeth.

The study, published online in the Journal of African Earth Sciences last week, shows that the rauisuchians were some of the latest-surviving members of their group, and that when they were alive, they were thriving close to the Antarctic Circle - the theoretical limit for their physiology.

"In the Triassic period, rauisuchians were widespread and their fossils are known from all continents except Antarctica," adds Tolchard. "They went extinct about 200 million years ago, paving the way for dinosaurs to become the dominant large land animals."

"Rick's study demonstrates the value of re-examining old specimens, and now we finally know what was preying on all those herbivorous dinosaurs!" says Professor Jonah Choiniere, Rick's advisor and Professor of Comparative Palaeobiology at the Wits Evolutionary Studies Institute.

Tolchard studied fossils from collections based at the the University of the Witwatersrand, the Iziko South African Museum and the National Museum in Bloemfontein. He was joined in the research by an international team, including researchers from the USA, Argentina and the UK.

Credit: 
University of the Witwatersrand

Study finds flaws in leading security lie detection training tool

image: The investigation concludes that the international airport security system, METT - the Micro-Expressions Training Tool, fails to improve lie detection rates beyond levels that can be achieved by simple guesswork.

Image: 
The University of Huddersfield

DEVELOPED by an influential U.S. psychologist, the Micro-Expressions Training Tool, or METT, inspired the hit TV show Lie to Me, which revolved around the uncanny ability of its lead character to tell truth from falsehood by analysing minute facial tics. And in the real world, METT is being used to train airport personnel to spot people who pose potential security risks.

But a research project involving a University of Huddersfield lecturer has concluded that METT training fails to improve lie detection rates beyond levels that can be achieved by guesswork.

The verdict is reported in a new article which concludes that the failure of METT is highly problematic "given that training in the recognition of micro-expressions composes a large part of a screening system that has become ever more pervasive in our aviation security".

METT is now an element of the Screening Passengers by Observation Technique (SPOT) used in airport security in the USA. This meant that research into its effectiveness was critical, state the article's authors.

One of them is the University of Huddersfield's Reader in Cognitive Psychology Dr Chris Street, who has made a speciality out of lie detection. He formed a collaboration with colleagues at two universities in the USA who had decided to carry out the first known full test of METT as a lie detection tool.

The findings are revealed in an article that appears in the Journal of Investigative Psychology and Offender Profiling.

METT-trained individuals performed no better

METT was developed by the psychologist Dr Paul Ekman, whose research group was the inspiration for TV series Lie to Me, starring Tim Roth. It is a form of training that aims to improve the detection of the micro-expressions sadness, anger, fear, disgust, contempt and happiness - fleeting expressions can last for as little as half a second.

"Recognising micro-expressions may have some utility as an aid for better recognising facial expressions, but it is more prominently promoted as a potential to aid in detecting deception," according to the new article, which then goes on to state that its research "does not paint an optimistic picture for the utility of METT".

The article describes the research process, which involved 90 students at a U.S. university. Some were randomly selected to receive METT training and some received bogus "placebo" training or none at all. They were shown stimulus videos containing truths and lies, taken from five different deception detection studies. One them was developed by Dr Street and colleagues.

The success rate of participants in telling truth from lies was then compiled. One of the findings was that METT-trained individuals performed no better than those who received bogus or no training and indeed performed worse than chance - "guessing would have produced marginally better results".

Commenting on the research project, Dr Street said: "METT is something that most people in the field felt didn't really hold up. The Ekman group argue that these micro-expressions help you to detect lies. But there really hasn't been any evidence to that effect. The problem now is that it has been brought into government usage in the U.S."

Credit: 
University of Huddersfield